| Status | Results | Project name | Input data | Way of selecting bridges | Last status changed | Job submitted | Key | User IP |
|---|---|---|---|---|---|---|---|---|
| finished | Trajectory analysis | Example of trajectory with only trivial lasso | input.pdb.bz2 | loops typed - trajectory | 2015-12-31 12:00:00 | 2015-12-31 12:00:00 | traj-l0 | exampleIP |
Download trajectory analysis output
Trajectory analysis log:
#Path to the analyzed file: input.xyz
#Id_begin_chain id_end_chain id_begin_loop id_end_loop: 1 62 33 62
#More detailed algorithm: False
#More detailed output: False
#Checked distances in the chain: True
#Minimal distance between crossings (not to be reduced): 10
#Minimal distance between crossing and tail end (not to be reduced): 3
#Minimal distance between crossing and loop (not to be reduced): 3
1 0 0 | | | L0
2 0 0 | | | L0
3 0 0 | | | L0
4 0 0 | | | L0
5 0 0 | | | L0
6 0 0 | | | L0
7 0 0 | | | L0
8 0 0 | | | L0
9 0 0 | | | L0
10 0 0 | | | L0
11 0 0 | | | L0
12 0 0 | | | L0
13 0 0 | | | L0
14 0 0 | | | L0
15 0 0 | | | L0
16 0 0 | | | L0
17 0 0 | | | L0
18 0 0 | | | L0
19 0 0 | | | L0
20 0 0 | | | L0
21 0 0 | | | L0
22 0 0 | | | L0
23 0 0 | | | L0
24 0 0 | | | L0
25 0 0 | | | L0
26 0 0 | | | L0
27 0 0 | | | L0
28 0 0 | | | L0
29 0 0 | | | L0
30 0 0 | | | L0
31 0 0 | | | L0
32 0 0 | | | L0
33 0 0 | | | L0
34 0 0 | | | L0
35 0 0 | | | L0
36 0 0 | | | L0
37 0 0 | | | L0
38 0 0 | | | L0
39 0 0 | | | L0
40 0 0 | | | L0
41 0 0 | | | L0
42 0 0 | | | L0
43 0 0 | | | L0
44 0 0 | | | L0
45 0 0 | | | L0
46 0 0 | | | L0
47 0 0 | | | L0
48 0 0 | | | L0
49 0 0 | | | L0
50 0 0 | | | L0
51 0 0 | | | L0
52 0 0 | | | L0
53 0 0 | | | L0
54 0 0 | | | L0
55 0 0 | | | L0
56 0 0 | | | L0
57 0 0 | | | L0
58 0 0 | | | L0
59 0 0 | | | L0
60 0 0 | | | L0
61 0 0 | | | L0
62 0 0 | | | L0
63 0 0 | | | L0
64 0 0 | | | L0
65 0 0 | | | L0
66 0 0 | | | L0
67 0 0 | | | L0
68 0 0 | | | L0
69 0 0 | | | L0
70 0 0 | | | L0
71 0 0 | | | L0
72 0 0 | | | L0
73 0 0 | | | L0
74 0 0 | | | L0
75 0 0 | | | L0
76 0 0 | | | L0
77 0 0 | | | L0
78 0 0 | | | L0
79 0 0 | | | L0
80 0 0 | | | L0
81 0 0 | | | L0
82 0 0 | | | L0
83 0 0 | | | L0
84 0 0 | | | L0
85 0 0 | | | L0
86 0 0 | | | L0
87 0 0 | | | L0
88 0 0 | | | L0
89 0 0 | | | L0
90 0 0 | | | L0
91 0 0 | | | L0
92 0 0 | | | L0
93 0 0 | | | L0
94 0 0 | | | L0
95 0 0 | | | L0
96 0 0 | | | L0
97 0 0 | | | L0
98 0 0 | | | L0
99 0 0 | | | L0
100 0 0 | | | L0
101 0 0 | | | L0
102 0 0 | | | L0
103 0 0 | | | L0
104 0 0 | | | L0
105 0 0 | | | L0
106 0 0 | | | L0
107 0 0 | | | L0
108 0 0 | | | L0
109 0 0 | | | L0
110 0 0 | | | L0
111 0 0 | | | L0
112 0 0 | | | L0
113 0 0 | | | L0
114 0 0 | | | L0
115 0 0 | | | L0
116 0 0 | | | L0
117 0 0 | | | L0
118 0 0 | | | L0
119 0 0 | | | L0
120 0 0 | | | L0
121 0 0 | | | L0
122 0 0 | | | L0
123 0 0 | | | L0
124 0 0 | | | L0
125 0 0 | | | L0
126 0 0 | | | L0
127 0 0 | | | L0
128 0 0 | | | L0
129 0 0 | | | L0
130 0 0 | | | L0
131 0 0 | | | L0
132 0 0 | | | L0
133 0 0 | | | L0
134 0 0 | | | L0
135 0 0 | | | L0
136 0 0 | | | L0
137 0 0 | | | L0
138 0 0 | | | L0
139 0 0 | | | L0
140 0 0 | | | L0
141 0 0 | | | L0
142 0 0 | | | L0
143 0 0 | | | L0
144 0 0 | | | L0
145 0 0 | | | L0
146 0 0 | | | L0
147 0 0 | | | L0
148 0 0 | | | L0
149 0 0 | | | L0
150 0 0 | | | L0
151 0 0 | | | L0
152 0 0 | | | L0
153 0 0 | | | L0
154 0 0 | | | L0
155 0 0 | | | L0
156 0 0 | | | L0
157 0 0 | | | L0
158 0 0 | | | L0
159 0 0 | | | L0
160 0 0 | | | L0
161 0 0 | | | L0
162 0 0 | | | L0
163 0 0 | | | L0
164 0 0 | | | L0
165 0 0 | | | L0
166 0 0 | | | L0
167 0 0 | | | L0
168 0 0 | | | L0
169 0 0 | | | L0
170 0 0 | | | L0
171 0 0 | | | L0
172 0 0 | | | L0
173 0 0 | | | L0
174 0 0 | | | L0
175 0 0 | | | L0
176 0 0 | | | L0
177 0 0 | | | L0
178 0 0 | | | L0
179 0 0 | | | L0
180 0 0 | | | L0
181 0 0 | | | L0
182 0 0 | | | L0
183 0 0 | | | L0
184 0 0 | | | L0
185 0 0 | | | L0
186 0 0 | | | L0
187 0 0 | | | L0
188 0 0 | | | L0
189 0 0 | | | L0
190 0 0 | | | L0
191 0 0 | | | L0
192 0 0 | | | L0
193 0 0 | | | L0
194 0 0 | | | L0
195 0 0 | | | L0
196 0 0 | | | L0
197 0 0 | | | L0
198 0 0 | | | L0
199 0 0 | | | L0
200 0 0 | | | L0
201 0 0 | | | L0
202 0 0 | | | L0
203 0 0 | | | L0
204 0 0 | | | L0
205 0 0 | | | L0
206 0 0 | | | L0
207 0 0 | | | L0
208 0 0 | | | L0
209 0 0 | | | L0
210 0 0 | | | L0
211 0 0 | | | L0
212 0 0 | | | L0
213 0 0 | | | L0
214 0 0 | | | L0
215 0 0 | | | L0
216 0 0 | | | L0
217 0 0 | | | L0
218 0 0 | | | L0
219 0 0 | | | L0
220 0 0 | | | L0
221 0 0 | | | L0
222 0 0 | | | L0
223 0 0 | | | L0
224 0 0 | | | L0
225 0 0 | | | L0
226 0 0 | | | L0
227 0 0 | | | L0
228 0 0 | | | L0
229 0 0 | | | L0
230 0 0 | | | L0
231 0 0 | | | L0
232 0 0 | | | L0
233 0 0 | | | L0
234 0 0 | | | L0
235 0 0 | | | L0
236 0 0 | | | L0
237 0 0 | | | L0
238 0 0 | | | L0
239 0 0 | | | L0
240 0 0 | | | L0
241 0 0 | | | L0
242 0 0 | | | L0
243 0 0 | | | L0
244 0 0 | | | L0
245 0 0 | | | L0
246 0 0 | | | L0
247 0 0 | | | L0
248 0 0 | | | L0
249 0 0 | | | L0
250 0 0 | | | L0
251 0 0 | | | L0
252 0 0 | | | L0
253 0 0 | | | L0
254 0 0 | | | L0
255 0 0 | | | L0
256 0 0 | | | L0
257 0 0 | | | L0
258 0 0 | | | L0
259 0 0 | | | L0
260 0 0 | | | L0
261 0 0 | | | L0
262 0 0 | | | L0
263 0 0 | | | L0
264 0 0 | | | L0
265 0 0 | | | L0
266 0 0 | | | L0
267 0 0 | | | L0
268 0 0 | | | L0
269 0 0 | | | L0
270 0 0 | | | L0
271 0 0 | | | L0
272 0 0 | | | L0
273 0 0 | | | L0
274 0 0 | | | L0
275 0 0 | | | L0
276 0 0 | | | L0
277 0 0 | | | L0
278 0 0 | | | L0
279 0 0 | | | L0
280 0 0 | | | L0
281 0 0 | | | L0
282 0 0 | | | L0
283 0 0 | | | L0
284 0 0 | | | L0
285 0 0 | | | L0
286 0 0 | | | L0
287 0 0 | | | L0
288 0 0 | | | L0
289 0 0 | | | L0
290 0 0 | | | L0
291 0 0 | | | L0
292 0 0 | | | L0
293 0 0 | | | L0
294 0 0 | | | L0
295 0 0 | | | L0
296 0 0 | | | L0
297 0 0 | | | L0
298 0 0 | | | L0
299 0 0 | | | L0
300 0 0 | | | L0
301 0 0 | | | L0
302 0 0 | | | L0
303 0 0 | | | L0
304 0 0 | | | L0
305 0 0 | | | L0
306 0 0 | | | L0
307 0 0 | | | L0
308 0 0 | | | L0
309 0 0 | | | L0
310 0 0 | | | L0
311 0 0 | | | L0
312 0 0 | | | L0
313 0 0 | | | L0
314 0 0 | | | L0
315 0 0 | | | L0
316 0 0 | | | L0
317 0 0 | | | L0
318 0 0 | | | L0
319 0 0 | | | L0
320 0 0 | | | L0
321 0 0 | | | L0
Each line of the output consists of the number of frame followed by: numbers of piercings for two tails - indexes of piercings on each tail - and lasso type of the loop (separated by "|"). The details are described in Help.
| Bridge type | Loop range | Loop length | N-term crossings | C-term crossings | N-end length | C-end length | Lasso loop area | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
L0 | 33-62 | 30 | 32 | -62 | 664 | |||||||